miRBase entry: der-mir-286

Stem-loop der-mir-286

Accession

MI0009030

Description

Drosophila erecta der-mir-286 precursor miRNA

Sequence

uuaaaauugaauggcgaaugucgguauggucucuuuuucaaagaagguuucgaucgagcgaagUGACUAGACCGAACACUCGUGCUauaauuuuaaaa
(((((((((....((((.(((((((.(((((.(((((((...(((...)))....))).)))).))))).)))).))).))))....)))))))))..

Structure

--         aaug    a   -    a     u    -   -aaa   g 
  uuaaaauug    gcga ugu cggu ugguc cuuu uuc    gaa  
  |||||||||    |||| ||| |||| ||||| |||| |||    ||| g
  aauuuuaau    UGCU ACA GCCA AUCAG gaag gag    cuu  
aa         aUCG    C   A    G     U    c   cuag   u

Annotation confidence Not enough data

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Genome context

scaffold_4845: 9749180-9749277 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from der-mir-286

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-286

Accession	MIMAT0008491
Description	Drosophila erecta der-miR-286 mature miRNA
Sequence	64 - UGACUAGACCGAACACUCGUGCU - 86
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218