Stem-loop der-mir-307

Accession

MI0009035

Description

Drosophila erecta der-mir-307 precursor miRNA

Literature search

1 open access papers mention der-mir-307
(2 sentences)

Sequence

174621 reads, 700.0 reads per million, 19 experiments

ugucuugcuuugACUCACUCAACCUGGGUGUGAuguuauuucgauaugguauccaUCACAACCUCCUUGAGUGAGcgauagcaggaca
((((((((((((.(((((((((...((.(((((((.((((.......))))..))))))).))...)))))))))))).)))))))))

Structure

         -   A         CCU  G       -u    uc 
ugucuugcu uug CUCACUCAA   GG UGUGAug  uauu  g
||||||||| ||| |||||||||   || |||||||  ||||  a
acaggacga agc GAGUGAGUU   CC ACACUac  augg  u
         u   -         CCU  A       cu    ua 

Annotation confidence Medium

Genome context

scaffold_4929: 8848884-8848971 [+]

Mature der-miR-307-5p

• Accession: MIMAT0053304
• Description: Drosophila erecta der-miR-307-5p mature miRNA
• Sequence: 13 - ACUCACUCAACCUGGGUGUGA - 33
• Evidence: not_experimental

Mature der-miR-307-3p

• Accession: MIMAT0008497
• Description: Drosophila erecta der-miR-307-3p mature miRNA
• Sequence: 56 - UCACAACCUCCUUGAGUGAG - 75
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218