Stem-loop der-mir-11

Accession

MI0009038

Description

Drosophila erecta der-mir-11 precursor miRNA

Sequence

1053121 reads, 4380.0 reads per million, 19 experiments

gcacuugcCAAGAACUUUCUCUGUGACCUGCGuguacugaaaagccgCAUCACAGUCUGAGUUCUUGCugagcgc
((.((((.(((((((((...((((((..((((.((........))))))))))))...))))))))).)))).))

Structure

  a    c         UCU      CC    u  acu 
gc cuug CAAGAACUU   CUGUGA  UGCG gu   g
|| |||| |||||||||   ||||||  |||| ||    
cg gagu GUUCUUGAG   GACACU  ACgc cg   a
  c    C         UCU      --    -  aaa 

Annotation confidence High

Genome context

scaffold_4770: 4217182-4217256 [+]

Mature der-miR-11-5p

• Accession: MIMAT0053307
• Description: Drosophila erecta der-miR-11-5p mature miRNA
• Sequence: 9 - CAAGAACUUUCUCUGUGACCUGCG - 32
• Evidence: not_experimental

Mature der-miR-11-3p

• Accession: MIMAT0008500
• Description: Drosophila erecta der-miR-11-3p mature miRNA
• Sequence: 48 - CAUCACAGUCUGAGUUCUUGC - 68
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218