miRBase entry: der-mir-275

Stem-loop der-mir-275

Accession

MI0009041

Description

Drosophila erecta der-mir-275 precursor miRNA

Sequence

aagucuccuaccuugcgcgcuaaucagugaccggggcugguuuuuuauauacagUCAGGUACCUGAAGUAGCGCGCGuggugccagacau
..((((..((((.(((((((((.((((..(((..(((((..(......)..))))).)))..))))..))))))))).))))..))))..

Structure

aa    cc    u         -a    ug   gg     gu uu 
  gucu  uacc ugcgcgcua  ucag  acc  ggcug  u  u
  ||||  |||| |||||||||  ||||  |||  |||||  |   
  caga  gugg GCGCGCGAU  AGUC  UGG  CUgac  a  u
ua    cc    u         GA    CA   -A     au ua

Annotation confidence Not enough data

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Genome context

scaffold_4929: 16344525-16344614 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from der-mir-275

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-275

Accession	MIMAT0008503
Description	Drosophila erecta der-miR-275 mature miRNA
Sequence	55 - UCAGGUACCUGAAGUAGCGCGCG - 77
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218