miRBase entry: der-mir-6-2

Stem-loop der-mir-6-2


Accession
MI0009048
Description
Drosophila erecta der-mir-6-2 precursor miRNA
Gene family
MIPF0000119; mir-6


Sequence

uaaccccagggaaccucugcugcugauauauuauugaaaacuccuaUAUCACAGUGGCUGUUCUUUUUgguug
(((((..(((((((..((((((.(((((((..............)))))))))))))..)))))))..)))))

Structure
     cc       cu      c       uuauug 
uaacc  agggaac  cugcug ugauaua      a
|||||  |||||||  |||||| |||||||       
guugg  UUUCUUG  GGUGAC ACUAUau      a
     UU       UC      -       ccucaa 


Annotation confidence Not enough data
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Genome context
scaffold_4845: 9748628-9748700 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from der-mir-6-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature der-miR-6

Accession MIMAT0008504
Description Drosophila erecta der-miR-6 mature miRNA
Sequence 47 - UAUCACAGUGGCUGUUCUUUUU - 68
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218