Stem-loop der-mir-285

Accession

MI0009053

Description

Drosophila erecta der-mir-285 precursor miRNA

Sequence

848703 reads, 3136.0 reads per million, 19 experiments

ucgagucgaagaACUGAGAUCGAUUGGUGCAUAGAuaucaagaagccccacucaauucaacucUAGCACCAUUCGAAAUCAGUGCuuuugauaagaaa
((..(((((((.(((((..((((.((((((.((((......(((...........)))...)))))))))).))))..)))))..)))))))..))..

Structure

--  ga       -a     GA    U      A    uaucaa   gccc 
  uc  gucgaag  ACUGA  UCGA UGGUGC UAGA      gaa    c
  ||  |||||||  |||||  |||| |||||| ||||      |||    a
  ag  uaguuuu  UGACU  AGCU ACCACG AUcu      cuu    c
aa  aa       CG     AA    U      -    ---caa   aacu 

Annotation confidence High

Genome context

scaffold_4784: 11929894-11929991 [-]

Mature der-miR-285-5p

• Accession: MIMAT0053317
• Description: Drosophila erecta der-miR-285-5p mature miRNA
• Sequence: 13 - ACUGAGAUCGAUUGGUGCAUAGA - 35
• Evidence: not_experimental

Mature der-miR-285-3p

• Accession: MIMAT0008514
• Description: Drosophila erecta der-miR-285-3p mature miRNA
• Sequence: 64 - UAGCACCAUUCGAAAUCAGUGC - 85
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218