Stem-loop der-mir-263b

Accession

MI0009055

Description

Drosophila erecta der-mir-263b precursor miRNA

Literature search

1 open access papers mention der-mir-263b
(7 sentences)

Sequence

1175225 reads, 4342.0 reads per million, 19 experiments

uagcugacuuugaguCUUGGCACUGGGAGAAUUCACaguugauuuuauuauucuGUGGUUCUGCGGGUGCCAAAAUuuaaucaacagcu
.(((((...((((((.((((((((.(.(((((.(((((.((((...))))..)))))))))).).)))))))).))))))....)))))

Structure

u     -acu      C        G G     U     -u    u 
 agcug    uugagu UUGGCACU G AGAAU CACag  ugau  
 |||||    |||||| |||||||| | ||||| |||||  |||| u
 ucgac    aauuUA AACCGUGG C UCUUG GUGuc  auua  
-     aacu      A        G G     -     uu    u 

Annotation confidence High

Genome context

scaffold_4784: 18090166-18090254 [-]

Mature der-miR-263b-5p

• Accession: MIMAT0008516
• Description: Drosophila erecta der-miR-263b-5p mature miRNA
• Sequence: 16 - CUUGGCACUGGGAGAAUUCAC - 36
• Evidence: not_experimental

Mature der-miR-263b-3p

• Accession: MIMAT0053319
• Description: Drosophila erecta der-miR-263b-3p mature miRNA
• Sequence: 55 - GUGGUUCUGCGGGUGCCAAAAU - 76
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218