Stem-loop der-mir-31a

Accession

MI0009058

Description

Drosophila erecta der-mir-31a precursor miRNA

Sequence

4760806 reads, 18751.0 reads per million, 19 experiments

uccguugguaaauUGGCAAGAUGUCGGCAUAGCUGAcguugaaaagcgcuuuuaaagagCGCUAUGCUGCAUCUAGUCAGUuguucaaugga
((((((((..(((((((.(((((.(((((((((....(((....)))(((((...))))))))))))))))))).)))))))..))))))))

Structure

        ua       A     U         UGAcguugaaaagc     u 
uccguugg  aauUGGC AGAUG CGGCAUAGC              gcuuu  
||||||||  ||||||| ||||| |||||||||              ||||| a
agguaacu  uUGACUG UCUAC GUCGUAUCG              Cgaga  
        ug       A     -         --------------     a 

Annotation confidence High

Genome context

scaffold_4845: 7899197-7899288 [-]

Mature der-miR-31a-5p

• Accession: MIMAT0008519
• Description: Drosophila erecta der-miR-31a-5p mature miRNA
• Sequence: 14 - UGGCAAGAUGUCGGCAUAGCUGA - 36
• Evidence: not_experimental

Mature der-miR-31a-3p

• Accession: MIMAT0053321
• Description: Drosophila erecta der-miR-31a-3p mature miRNA
• Sequence: 60 - CGCUAUGCUGCAUCUAGUCAGU - 81
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218