miRBase entry: der-mir-305

Stem-loop der-mir-305

Accession

MI0009067

Description

Drosophila erecta der-mir-305 precursor miRNA

Sequence

caugucuAUUGUACUUCAUCAGGUGCUCUGgugugguccguaacccggcacauguugaaguacacucaauaug
(((((....(((((((((.((.(((((..((.((........))))))))).)).)))))))))....)))))

Structure

     cuAU         U  G     CU  u  ggu 
caugu    UGUACUUCA CA GUGCU  Gg gu   c
|||||    ||||||||| || |||||  || ||    
guaua    acaugaagu gu cacgg  cc ca   c
     acuc         u  a     --  -  aug

Annotation confidence Not enough data

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Genome context

scaffold_4929: 16344698-16344770 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from der-mir-305

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-305

Accession	MIMAT0008527
Description	Drosophila erecta der-miR-305 mature miRNA
Sequence	8 - AUUGUACUUCAUCAGGUGCUCUG - 30
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218