Stem-loop der-mir-314

Accession

MI0009069

Description

Drosophila erecta der-mir-314 precursor miRNA

Sequence

4223288 reads, 15722.0 reads per million, 19 experiments

ucgUAACUUGUGUGGCUUCGAAUGUACCuaguugaggaagaaucccaugucggauuuuguuaccucuggUAUUCGAGCCAAUAAGUUCGG
.((.(((((((.(((((.(((..(((((.....((((.(((((((......)))))))....)))).)))))))))))))))))))))).

Structure

u  U       G     U   AU     uaguu    ---a       ca 
 cg AACUUGU UGGCU CGA  GUACC     gagg    agaaucc  u
 || ||||||| ||||| |||  |||||     ||||    |||||||   
 GC UUGAAUA ACCGA GCU  UAUgg     cucc    uuuuagg  g
G  -       -     -   --     ----u    auug       cu 

Annotation confidence Medium

Genome context

scaffold_4784: 11743724-11743813 [+]

Mature der-miR-314-5p

• Accession: MIMAT0053326
• Description: Drosophila erecta der-miR-314-5p mature miRNA
• Sequence: 4 - UAACUUGUGUGGCUUCGAAUGUACC - 28
• Evidence: not_experimental

Mature der-miR-314-3p

• Accession: MIMAT0008528
• Description: Drosophila erecta der-miR-314-3p mature miRNA
• Sequence: 70 - UAUUCGAGCCAAUAAGUUCGG - 90
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218