Stem-loop der-mir-2b-1

Accession

MI0009076

Description

Drosophila erecta der-mir-2b-1 precursor miRNA

Sequence

4308903 reads, 16635.0 reads per million, 19 experiments

cuucaacuGUCUUCAAAGUGGCGGUGACAUGuugucagcaauauucaUAUCACAGCCAGCUUUGAGGAGCGuugcgg
((.((((..(((((((((((((.((((.((((((....)))))).....)))).)))).)))))))))..)))).))

Structure

  u    uG         -    G    ----C      u 
cu caac  UCUUCAAAG UGGC GUGA     AUGuug c
|| ||||  ||||||||| |||| ||||     ||||||  
gg guuG  AGGAGUUUC ACCG CACU     uauaac a
  c    CG         G    A    AUacu      g 

Annotation confidence High

Genome context

scaffold_4929: 17167554-17167630 [-]

Mature der-miR-2b-1-5p

• Accession: MIMAT0053333
• Description: Drosophila erecta der-miR-2b-1-5p mature miRNA
• Sequence: 9 - GUCUUCAAAGUGGCGGUGACAUG - 31
• Evidence: not_experimental

Mature der-miR-2b-3p

• Accession: MIMAT0008535
• Description: Drosophila erecta der-miR-2b-3p mature miRNA
• Sequence: 48 - UAUCACAGCCAGCUUUGAGGAGCG - 71
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218