Stem-loop der-mir-315

Accession

MI0009080

Description

Drosophila erecta der-mir-315 precursor miRNA

Sequence

109918 reads, 484.0 reads per million, 19 experiments

cacuuauauaaUUUUGAUUGUUGCUCAGAAAGCccuauuaucuaacagcuggCUUUCGAGCAAUAAUUGAAACCagauaagug
(((((((....(((((((((((((((.(((((((................))))))))))))))))))))))....)))))))

Structure

       auaa               A       cuauuau 
cacuuau    UUUUGAUUGUUGCUC GAAAGCc       c
|||||||    ||||||||||||||| |||||||        
gugaaua    AAAGUUAAUAACGAG CUUUCgg       u
       gaCC               -       ucgacaa 

Annotation confidence High

Genome context

scaffold_4784: 18670610-18670692 [+]

Mature der-miR-315-5p

• Accession: MIMAT0008539
• Description: Drosophila erecta der-miR-315-5p mature miRNA
• Sequence: 12 - UUUUGAUUGUUGCUCAGAAAGC - 33
• Evidence: not_experimental

Mature der-miR-315-3p

• Accession: MIMAT0053336
• Description: Drosophila erecta der-miR-315-3p mature miRNA
• Sequence: 53 - CUUUCGAGCAAUAAUUGAAACC - 74
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218