Stem-loop der-mir-219

Accession

MI0009094

Description

Drosophila erecta der-mir-219 precursor miRNA

Sequence

139148 reads, 506.0 reads per million, 19 experiments

uaauucgauuuuuagcuaUGAUUGUCCAAACGCAAUUCUUGuugauauucaauauucaAGGGUUGCGACUGGGCAUCGCGgcucgaaauaagaauac
..((((.(((((.((((.((((.(((((..(((((((((((..(((((...))))))))))))))))..))))))))).)))).)))))..))))..

Structure

ua    -g     u    a    U     AA           uu     u 
  auuc  auuuu agcu UGAU GUCCA  CGCAAUUCUUG  gauau  
  ||||  ||||| |||| |||| |||||  |||||||||||  ||||| c
  uaag  uaaag ucgG GCUA CGGGU  GCGUUGGGAac  uuaua  
ca    aa     c    C    -     CA           --     a 

Annotation confidence High

Genome context

scaffold_4784: 16541320-16541416 [-]

Mature der-miR-219-5p

• Accession: MIMAT0008552
• Description: Drosophila erecta der-miR-219-5p mature miRNA
• Sequence: 19 - UGAUUGUCCAAACGCAAUUCUUG - 41
• Evidence: not_experimental

Mature der-miR-219-3p

• Accession: MIMAT0053348
• Description: Drosophila erecta der-miR-219-3p mature miRNA
• Sequence: 59 - AGGGUUGCGACUGGGCAUCGCG - 80
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218