miRBase entry: der-mir-2b-2

Stem-loop der-mir-2b-2

Accession

MI0009096

Description

Drosophila erecta der-mir-2b-2 precursor miRNA

Sequence

uugugucauucuucaaagugguugugaaauguuugccuuuuuaugccuauucaUAUCACAGCCAGCUUUGAGGAGCgacgcga
(((((((.(((((((((((((((((((.(((...((........)).....))).))))))))).)))))))))).)))))))

Structure

       a          -         a   --uuu  cuu 
uuguguc uucuucaaag ugguuguga aug     gc   u
||||||| |||||||||| ||||||||| |||     ||    
agcgcag GAGGAGUUUC ACCGACACU Uac     cg   u
       C          G         A   uuauc  uau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_4845: 4719526-4719608 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from der-mir-2b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-2b

Accession	MIMAT0008535
Description	Drosophila erecta der-miR-2b mature miRNA
Sequence	54 - UAUCACAGCCAGCUUUGAGGAGC - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218