Stem-loop der-mir-2b-2

Accession

MI0009096

Description

Drosophila erecta der-mir-2b-2 precursor miRNA

Sequence

4311951 reads, 16664.0 reads per million, 19 experiments

uugugucaUUCUUCAAAGUGGUUGUGAAAUGuuugccuuuuuaugccuauucaUAUCACAGCCAGCUUUGAGGAGCGacgcga
(((((((.(((((((((((((((((((.(((...((........)).....))).))))))))).)))))))))).)))))))

Structure

       a          -         A   --uuu  cuu 
uuguguc UUCUUCAAAG UGGUUGUGA AUG     gc   u
||||||| |||||||||| ||||||||| |||     ||    
agcgcaG GAGGAGUUUC ACCGACACU Uac     cg   u
       C          G         A   uuauc  uau 

Annotation confidence High

Genome context

scaffold_4845: 4719526-4719608 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from der-mir-2b-2

Mature der-miR-2b-2-5p

• Accession: MIMAT0053334
• Description: Drosophila erecta der-miR-2b-2-5p mature miRNA
• Sequence: 9 - UUCUUCAAAGUGGUUGUGAAAUG - 31
• Evidence: not_experimental

Mature der-miR-2b-3p

• Accession: MIMAT0008535
• Description: Drosophila erecta der-miR-2b-3p mature miRNA
• Sequence: 54 - UAUCACAGCCAGCUUUGAGGAGCG - 77
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218