miRBase entry: der-mir-289

Stem-loop der-mir-289


Accession
MI0009098
Description
Drosophila erecta der-mir-289 precursor miRNA
Gene family
MIPF0000222; mir-289


Sequence

aguuuacaguaaaaUAAAUAUUUAAGUGGAGCCUGCGACUccagucccucugacggacugggguaacucacuugagcguuuguuggcacguaaaag
..(((((.((..(((((((.(((((((((.....(..((((((((((.......))))))))))..)))))))))).)))))))...)))))))..

Structure
ag     a  -aa       A         AGCCU CG          cu 
  uuuac gu   aaUAAAU UUUAAGUGG     G  ACUccagucc  c
  ||||| ||   ||||||| |||||||||     |  ||||||||||  u
  aaaug ca   uuguuug gaguucacu     c  uggggucagg  g
ga     -  cgg       c         ----- aa          ca 


Annotation confidence Not enough data
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Genome context
scaffold_4784: 13614871-13614966 [+]

Database links

Mature der-miR-289

Accession MIMAT0008555
Description Drosophila erecta der-miR-289 mature miRNA
Sequence 15 - UAAAUAUUUAAGUGGAGCCUGCGACU - 40
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218