Stem-loop dgr-mir-281-1

Accession

MI0009128

Description

Drosophila grimshawi dgr-mir-281-1 precursor miRNA

Sequence

cgaauaagugaauaAAGAGAGCUGUCCGUCGACAGUccaguauaaauuuuaauacUGUCAUGGAAUUGCUCUCUUUGUaugauauucg
((((((.....(((((((((((..(((((.((((((.................)))))))))))...)))))))))))....))))))

Structure

      aguga           -UG     C      ccaguau 
cgaaua     auaAAGAGAGC   UCCGU GACAGU       a
||||||     |||||||||||   ||||| ||||||       a
gcuuau     UGUUUCUCUCG   AGGUA CUGUca       a
      -agua           UUA     -      uaauuuu 

Annotation confidence Not enough data

Genome context

scaffold_15245: 18178200-18178287 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dgr-mir-281-1

Mature dgr-miR-281-1-5p

• Accession: MIMAT0008587
• Description: Drosophila grimshawi dgr-miR-281-1-5p mature miRNA
• Sequence: 15 - AAGAGAGCUGUCCGUCGACAGU - 36
• Evidence: not_experimental

Mature dgr-miR-281-3p

• Accession: MIMAT0008588
• Description: Drosophila grimshawi dgr-miR-281-3p mature miRNA
• Sequence: 56 - UGUCAUGGAAUUGCUCUCUUUGU - 78
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218