miRBase entry: dgr-mir-92b

Stem-loop dgr-mir-92b

Accession

MI0009178

Description

Drosophila grimshawi dgr-mir-92b precursor miRNA

Sequence

aacgucaccugauguaggucgugccuggugcuuauuuguuguuaugugaaaauacaAAUUGCACUAGUCCCGGCCUGCagugagugucgca
..((.(((....(((((((((.(.(((((((..((((((..((......))..)))))).))))))).).)))))))))....))).))..

Structure

aa  u   cuga         u c       uu      ug  au 
  cg cac    uguaggucg g cuggugc  auuugu  uu  g
  || |||    ||||||||| | |||||||  ||||||  ||   
  gc gug    aCGUCCGGC C GAUCACG  UAAaca  aa  u
ac  u   agug         C U       -U      ua  ag

Annotation confidence Not enough data

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Genome context

scaffold_14906: 3026549-3026639 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dgr-mir-92b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dgr-miR-92b

Accession	MIMAT0008624
Description	Drosophila grimshawi dgr-miR-92b mature miRNA
Sequence	57 - AAUUGCACUAGUCCCGGCCUGC - 78
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218