miRBase entry: dmo-mir-13a

Stem-loop dmo-mir-13a

Accession

MI0009214

Description

Drosophila mojavensis dmo-mir-13a precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

ugcguaacucuucaagggguugugaaauguagccauuaucaagucaUAUCACAGCCAUUUUGAUGAGUuucgug
.(((.(((((.((((((((((((((.(((...............))).)))))))).)))))).))))).))).

Structure

u   u     u      -        a   uagcca 
 gcg aacuc ucaagg gguuguga aug      u
 ||| ||||| |||||| |||||||| |||      u
 ugc uUGAG AGUUUU CCGACACU Uac      a
g   u     U      A        A   ugaacu

Annotation confidence Not enough data

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Genome context

scaffold_6540: 10568354-10568427 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dmo-mir-13a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-13a

Accession	MIMAT0008661
Description	Drosophila mojavensis dmo-miR-13a mature miRNA
Sequence	47 - UAUCACAGCCAUUUUGAUGAGU - 68
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218