miRBase entry: dmo-mir-133

Stem-loop dmo-mir-133

Accession

MI0009231

Description

Drosophila mojavensis dmo-mir-133 precursor miRNA

Sequence

caacgcuguguguaguugguugacaucgggucagaucuguuuuucgagaauUUGGUCCCCUUCAACCAGCUGUagcagugguugau
(((((((((...(((((((((((....(((((((((((........)).)))))).)))..)))))))))))..))))).))))..

Structure

--    -     gug           cauc   -      -  guu 
  caac gcugu   uaguugguuga    ggg ucagau cu   u
  |||| |||||   |||||||||||    ||| |||||| ||    
  guug ugacg   GUCGACCAACU    CCC GGUUua ga   u
ua    g     -aU           --UC   U      a  gcu

Annotation confidence Not enough data

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Genome context

scaffold_6500: 24707677-24707762 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dmo-mir-133

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-133

Accession	MIMAT0008678
Description	Drosophila mojavensis dmo-miR-133 mature miRNA
Sequence	52 - UUGGUCCCCUUCAACCAGCUGU - 73
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218