Stem-loop dmo-mir-279

Accession

MI0009235

Description

Drosophila mojavensis dmo-mir-279 precursor miRNA

Literature search

1 open access papers mention dmo-mir-279
(1 sentences)

Sequence

guacuacuguuuuuagugagugaggguccaguguuucacauuguuugcuuaaguauuugUGACUAGAUCCACACUCAUUAAaaacgguaguuc
..((((((((((((((((((((.(((((.((....(((((.....(((....)))..))))))).))))).))))))))))))))))))))..

Structure

gu                    a     c  uguu     uuguu   u 
  acuacuguuuuuagugagug ggguc ag    ucaca     ugc u
  |||||||||||||||||||| ||||| ||    |||||     |||  
  ugauggcaaaAAUUACUCAC CCUAG UC    AGUgu     aug a
cu                    A     A  ----     ---uu   a 

Annotation confidence Not enough data

Genome context

ref|NW_001979112.1|: 26447138-26447230 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dmo-mir-279

Mature dmo-miR-279-3p

• Accession: MIMAT0008682
• Description: Drosophila mojavensis dmo-miR-279-3p mature miRNA
• Sequence: 60 - UGACUAGAUCCACACUCAUUAA - 81
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218