miRBase entry: dmo-mir-13b-1

Stem-loop dmo-mir-13b-1

Accession

MI0009251

Description

Drosophila mojavensis dmo-mir-13b-1 precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

ccaugucguuaaaaugucugugaccguauguauucacuaucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((..........)))))))))).)))))))))))...)))

Structure

   -ug           u      ccg    uauu 
cca   ucguuaaaaug cuguga   uaug    c
|||   ||||||||||| ||||||   ||||     
ggu   AGCAGUUUUAC GACACU   AUac    a
   uUG           C      ---    uauc

Annotation confidence Not enough data

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Genome context

scaffold_6540: 10568524-10568591 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dmo-mir-13b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-13b

Accession	MIMAT0008636
Description	Drosophila mojavensis dmo-miR-13b mature miRNA
Sequence	43 - UAUCACAGCCAUUUUGACGAGU - 64
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218