miRBase entry: dpe-mir-283

Stem-loop dpe-mir-283

Accession

MI0009267

Description

Drosophila persimilis dpe-mir-283 precursor miRNA

Sequence

acgauucucaaaggUAAAUAUCAGCUGGUAAUUCUgggagcuaagcaagauaugaaacacucggaauuucaguugguaucgacuuuuuugaauu
..(((((..((((((..(((((((((((.(((((((((.....................))))))))))))))))))))..))))))..)))))

Structure

ac     uc      AA           U         agcuaagca 
  gauuc  aaaggU  AUAUCAGCUGG AAUUCUggg         a
  |||||  ||||||  ||||||||||| |||||||||         g
  uuaag  uuuuca  uaugguugacu uuaaggcuc         a
--     uu      gc           -         acaaaguau

Annotation confidence Not enough data

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Genome context

scaffold_26: 1090726-1090819 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dpe-mir-283

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpe-miR-283

Accession	MIMAT0008713
Description	Drosophila persimilis dpe-miR-283 mature miRNA
Sequence	15 - UAAAUAUCAGCUGGUAAUUCU - 35
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218