miRBase entry: dpe-mir-219

Stem-loop dpe-mir-219


Accession
MI0009273
Description
Drosophila persimilis dpe-mir-219 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

uaauucgauuuuuagcuaUGAUUGUCCAAACGCAAUUCUUGuugauauccaauacucaaggguugugacuggacaucgcggcucgaaauaagaauac
..((((.(((((.((((.((((.(((((..(((((((((((...............)))))))))))..))))))))).)))).)))))..))))..

Structure
ua    -g     u    a    U     AA           uugaua 
  auuc  auuuu agcu UGAU GUCCA  CGCAAUUCUUG      u
  ||||  ||||| |||| |||| |||||  |||||||||||      c
  uaag  uaaag ucgg gcua caggu  guguugggaac      c
ca    aa     c    c    -     ca           ucauaa 


Annotation confidence Not enough data
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Genome context
scaffold_35: 387470-387566 [+]

Database links

Mature dpe-miR-219

Accession MIMAT0008719
Description Drosophila persimilis dpe-miR-219 mature miRNA
Sequence 19 - UGAUUGUCCAAACGCAAUUCUUG - 41
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218