Stem-loop dpe-bantam

Accession

MI0009275

Description

Drosophila persimilis dpe-bantam precursor miRNA

Literature search

2 open access papers mention dpe-bantam
(6 sentences)

Sequence

auuugacuacgaaaccgguuuucgauuugguuugacuguuuuuuauacaagUGAGAUCAUUUUGAAAGCUGAUUuugucaa
........((((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))...

Structure

auuugacu      c          uu      g   -  uu 
        acgaaa cgguuuucga  ugguuu acu gu  u
        |||||| ||||||||||  |||||| ||| ||  u
        uguuUU GUCGAAAGUU  ACUAGA Uga ca  u
-----aac      A          UU      G   a  ua 

Annotation confidence Not enough data

Genome context

scaffold_29: 844621-844701 [-]

Mature dpe-bantam-3p

• Accession: MIMAT0008721
• Description: Drosophila persimilis dpe-bantam-3p mature miRNA
• Sequence: 52 - UGAGAUCAUUUUGAAAGCUGAUU - 74
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218