Stem-loop dpe-mir-87

Accession

MI0009287

Description

Drosophila persimilis dpe-mir-87 precursor miRNA

Sequence

cauauuucauucgcgccuguaucuugcugaaccguagccauaauggucuuucaucccggUUGAGCAAAAUUUCAGGUGUGugagaaauuuguu
((.(((((.(.((((((((.((.(((((.(((((..((((...)))).........))))).))))).))..)))))))).).))))).))..

Structure

--  u     a u        -u  c     g     -------ua    u 
  ca auuuc u cgcgccug  au uugcu aaccg         gcca  
  || ||||| | ||||||||  || ||||| |||||         |||| a
  gu uaaag g GUGUGGAC  UA AACGA UUggc         uggu  
uu  u     a u        UU  A     G     ccuacuuuc    a 

Annotation confidence Not enough data

Genome context

scaffold_1: 1694922-1695014 [+]

Mature dpe-miR-87

• Accession: MIMAT0008733
• Description: Drosophila persimilis dpe-miR-87 mature miRNA
• Sequence: 60 - UUGAGCAAAAUUUCAGGUGUG - 80
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218