Stem-loop dpe-mir-13b-1

Accession

MI0009291

Description

Drosophila persimilis dpe-mir-13b-1 precursor miRNA

Sequence

ccaugucguuaaaauguuugugaccuuauguacucuugaaucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((...........)))))))))).)))))))))))...)))

Structure

   -ug           u      ccu    uacu 
cca   ucguuaaaaug uuguga   uaug    c
|||   ||||||||||| ||||||   ||||    u
ggu   AGCAGUUUUAC GACACU   AUac    u
   uUG           C      ---    uaag 

Annotation confidence Not enough data

Genome context

scaffold_0: 10659936-10660004 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dpe-mir-13b-1

Mature dpe-miR-13b

• Accession: MIMAT0008711
• Description: Drosophila persimilis dpe-miR-13b mature miRNA
• Sequence: 44 - UAUCACAGCCAUUUUGACGAGU - 65
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218