miRBase entry: dpe-mir-33

Stem-loop dpe-mir-33


Accession
MI0009299
Description
Drosophila persimilis dpe-mir-33 precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

cggagaugacacgcAGGUGCAUUGUAGUCGCAUUGucuguccaucuugauuucaggcaauacaacugcagugcaagcucugugcauuuca
..((((((.((((.((.(((((((((((.(.((((((((.............)))))))).).)))))))))))..)).)))))))))).

Structure
cg      a    c  -G           C C        uccau 
  gagaug cacg AG  UGCAUUGUAGU G AUUGucug     c
  |||||| |||| ||  ||||||||||| | ||||||||     u
  cuuuac gugu uc  acgugacguca c uaacggac     u
-a      -    c  ga           a a        uuuag 


Annotation confidence Not enough data
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Genome context
scaffold_47: 414007-414096 [+]

Database links

Mature dpe-miR-33

Accession MIMAT0008743
Description Drosophila persimilis dpe-miR-33 mature miRNA
Sequence 15 - AGGUGCAUUGUAGUCGCAUUG - 35
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218