Stem-loop dpe-mir-79

Accession

MI0009304

Description

Drosophila persimilis dpe-mir-79 precursor miRNA

Sequence

cugcuucugcuuuggcgcuuuagcuguaugauagauuuaaaauacuucaUAAAGCUAGAUUACCAAAGCAUuggcuc
..(((..((((((((...(((((((.(((((...............))))).)))))))...))))))))..)))..

Structure

cu   uc        cgc       g     uagauu 
  gcu  ugcuuugg   uuuagcu uauga      u
  |||  ||||||||   ||||||| |||||      a
  cgg  ACGAAACC   AGAUCGA AUacu      a
cu   uU        AUU       A     ucauaa 

Annotation confidence Not enough data

Genome context

scaffold_1: 9895123-9895199 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from dpe-mir-79

Mature dpe-miR-79

• Accession: MIMAT0008747
• Description: Drosophila persimilis dpe-miR-79 mature miRNA
• Sequence: 50 - UAAAGCUAGAUUACCAAAGCAU - 71
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218