miRBase entry: dpe-mir-10

Stem-loop dpe-mir-10


Accession
MI0009311
Description
Drosophila persimilis dpe-mir-10 precursor miRNA


Sequence

ccacgucuACCCUGUAGAUCCGAAUUUGUuuuacauuagcuuuaaggacaaauucgguucuagagagguuugugugg
(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))

Structure
     ucu   -  G    U             acauu 
ccacg   ACC CU UAGA CCGAAUUUGUuuu     a
|||||   ||| || |||| |||||||||||||      
ggugu   ugg ga aucu ggcuuaaacagga     g
     guu   a  g    u             auuuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_3: 2487694-2487770 [+]

Database links

Mature dpe-miR-10

Accession MIMAT0008754
Description Drosophila persimilis dpe-miR-10 mature miRNA
Sequence 9 - ACCCUGUAGAUCCGAAUUUGU - 29
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218