miRBase entry: dpe-let-7-2

Stem-loop dpe-let-7-2

Accession

MI0009316

Description

Drosophila persimilis dpe-let-7-2 precursor miRNA

Sequence

ucuggcaaauUGAGGUAGUAGGUUGUAUAGUaguacuucagaucguacuauacaaugugcuagcuuucuuugcuuga
((.((((((..(((.(((((.(((((((((((.............))))))))))).))))).)))..)))))).))

Structure

  u      uU   G     G           guacu 
uc ggcaaa  GAG UAGUA GUUGUAUAGUa     u
|| ||||||  ||| ||||| |||||||||||     c
ag ucguuu  uuc aucgu uaacauaucau     a
  u      cu   g     g           gcuag

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_2335: 2160-2236 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dpe-let-7-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpe-let-7

Accession	MIMAT0008699
Description	Drosophila persimilis dpe-let-7 mature miRNA
Sequence	11 - UGAGGUAGUAGGUUGUAUAGU - 31
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218