miRBase entry: dpe-mir-92a

Stem-loop dpe-mir-92a

Accession

MI0009325

Description

Drosophila persimilis dpe-mir-92a precursor miRNA

Sequence

uagagauugcccguaggacgggaaggugucaacguuuuacauuuugaacaaaCAUUGCACUUGUCCCGGCCUAUgggcggcuugu
..(((.(((((((((((.((((((((((.(((.((((............)))).)))))))).))))).))))))))))))))..

Structure

ua   a           a     -     u   c    uacau 
  gag uugcccguagg cggga aggug caa guuu     u
  ||| ||||||||||| ||||| ||||| ||| ||||      
  uuc ggcgggUAUCC GCCCU UUCAC GUU Caaa     u
ug   -           G     G     -   A    caagu

Annotation confidence Not enough data

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Genome context

scaffold_3: 6410324-6410408 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dpe-mir-92a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpe-miR-92a

Accession	MIMAT0008763
Description	Drosophila persimilis dpe-miR-92a mature miRNA
Sequence	53 - CAUUGCACUUGUCCCGGCCUAU - 74
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218