Stem-loop dse-mir-280

Accession

MI0009329

Description

Drosophila sechellia dse-mir-280 precursor miRNA

Sequence

uggcuuuuaUGUAUUUACGUUGCAUAUGAAAUGAUAuuuauaguaaacagauuauuuuauaugcagguauaugcaagucgagguccu
.((((((..(((((.(((.((((((((((((((((...............))))))))))))))))))).)))))....))))))..

Structure

-u      --ua     U   G                Auuuau 
  ggcuuu    UGUAU UAC UUGCAUAUGAAAUGAU      a
  ||||||    ||||| ||| ||||||||||||||||      g
  cuggag    acgua aug gacguauauuuuauua      u
uc      cuga     u   -                gacaaa 

Annotation confidence Not enough data

Genome context

scaffold_1: 1832288-1832374 [+]

Mature dse-miR-280

• Accession: MIMAT0008767
• Description: Drosophila sechellia dse-miR-280 mature miRNA
• Sequence: 10 - UGUAUUUACGUUGCAUAUGAAAUGAUA - 36
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218