miRBase entry: dse-mir-287

Stem-loop dse-mir-287

Accession

MI0009332

Description

Drosophila sechellia dse-mir-287 precursor miRNA

Sequence

uguagggucggaaauuuugcacacauuuacaauaauuguaaaUGUGUUGAAAAUCGUUUGCACgacuguga
..((.(((((((((((((..((((((((((((...))))))))))))..)))...)))).).))))).)).

Structure

ug  g     - -    ---   gc            u 
  ua ggucg g aaau   uuu  acacauuuacaa  
  || ||||| | ||||   |||  |||||||||||| a
  gu ucagC C UUUG   AAA  UGUGUaaauguu  
-a  g     A G    CUA   GU            a

Annotation confidence Not enough data

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Genome context

scaffold_7: 1215470-1215540 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dse-mir-287

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-287

Accession	MIMAT0008770
Description	Drosophila sechellia dse-miR-287 mature miRNA
Sequence	43 - UGUGUUGAAAAUCGUUUGCAC - 63
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218