Stem-loop dse-mir-8

Accession

MI0009334

Description

Drosophila sechellia dse-mir-8 precursor miRNA

Sequence

179634 reads, 56542.0 reads per million, 1 experiments

aaggacaucuguucaCAUCUUACCGGGCAGCAUUAGAUccuuuuuaaaacucUAAUACUGUCAGGUAAAGAUGUCguccguguccuu
((((((((......((((((((((.(((((.((((((.............)))))).))))).))).))))))).....))))))))

Structure

        cuguuc       -   G     C      Uccuu 
aaggacau      aCAUCUU ACC GGCAG AUUAGA     u
||||||||      ||||||| ||| ||||| ||||||     u
uuccugug      UGUAGAA UGG CUGUC UAAUcu     u
        -ccugC       A   A     A      caaaa 

Annotation confidence High

Genome context

scaffold_1: 10223808-10223894 [+]

Mature dse-miR-8-5p

• Accession: MIMAT0053454
• Description: Drosophila sechellia dse-miR-8-5p mature miRNA
• Sequence: 16 - CAUCUUACCGGGCAGCAUUAGAU - 38
• Evidence: not_experimental

Mature dse-miR-8-3p

• Accession: MIMAT0008772
• Description: Drosophila sechellia dse-miR-8-3p mature miRNA
• Sequence: 53 - UAAUACUGUCAGGUAAAGAUGUC - 75
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218