Stem-loop dse-mir-87

Accession

MI0009335

Description

Drosophila sechellia dse-mir-87 precursor miRNA

Sequence

cacauuucauucgcgccuguaucuugcugaaccgcugccaucauggccaacgauccggUUGAGCAAAAUUUCAGGUGUGugagaaauguguu
((((((((.(.((((((((.((.(((((.(((((..((((...))))........))))).))))).))..)))))))).).))))))))..

Structure

--        a u        -u  c     g     ------cu    u 
  cacauuuc u cgcgccug  au uugcu aaccg        gcca  
  |||||||| | ||||||||  || ||||| |||||        |||| c
  guguaaag g GUGUGGAC  UA AACGA UUggc        cggu  
uu        a u        UU  A     G     cuagcaac    a 

Annotation confidence Not enough data

Genome context

scaffold_3: 5397147-5397238 [-]

Mature dse-miR-87

• Accession: MIMAT0008773
• Description: Drosophila sechellia dse-miR-87 mature miRNA
• Sequence: 59 - UUGAGCAAAAUUUCAGGUGUG - 79
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218