miRBase entry: dse-mir-92b

Stem-loop dse-mir-92b

Accession

MI0009336

Description

Drosophila sechellia dse-mir-92b precursor miRNA

Sequence

aacgucaccugauguaggccgugcccagugcuuauuuguugccuuuucgaaauacaAAUUGCACUAGUCCCGGCCUGCagugagugucgca
..((.(((....(((((((((.(.(.(((((..((((((..............)))))).))))).).).)))))))))....))).))..

Structure

aa  u   cuga         u c c     uu      ugccuu 
  cg cac    uguaggccg g c agugc  auuugu      u
  || |||    ||||||||| | | |||||  ||||||       
  gc gug    aCGUCCGGC C G UCACG  UAAaca      u
ac  u   agug         C U A     -U      uaaagc

Annotation confidence Not enough data

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Genome context

scaffold_13: 263931-264021 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dse-mir-92b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-92b

Accession	MIMAT0008774
Description	Drosophila sechellia dse-miR-92b mature miRNA
Sequence	57 - AAUUGCACUAGUCCCGGCCUGC - 78
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218