miRBase entry: dse-mir-2b-2

Stem-loop dse-mir-2b-2

Accession

MI0009345

Description

Drosophila sechellia dse-mir-2b-2 precursor miRNA

Sequence

uugugucauucuucaaagugguugugaaauguuugccuuuuuaugccuauucaUAUCACAGCCAGCUUUGAGGAGCgacgcga
(((((((.(((((((((((((((((((.(((...((........)).....))).))))))))).)))))))))).)))))))

Structure

       a          -         a   --uuu  cuu 
uuguguc uucuucaaag ugguuguga aug     gc   u
||||||| |||||||||| ||||||||| |||     ||    
agcgcag GAGGAGUUUC ACCGACACU Uac     cg   u
       C          G         A   uuauc  uau

Annotation confidence Not enough data

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Genome context

scaffold_7: 3184535-3184617 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dse-mir-2b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-2b

Accession	MIMAT0008780
Description	Drosophila sechellia dse-miR-2b mature miRNA
Sequence	54 - UAUCACAGCCAGCUUUGAGGAGC - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218