miRBase entry: dse-mir-10

Stem-loop dse-mir-10


Accession
MI0009346
Description
Drosophila sechellia dse-mir-10 precursor miRNA


Sequence

1054050 reads, 331776.0 reads per million, 1 experiments
ccacgucuACCCUGUAGAUCCGAAUUUGUuuuauacuagcuuuaaggaCAAAUUCGGUUCUAGAGAGGUUUgugugg
(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))

Structure
     ucu   -  G    U             auacu 
ccacg   ACC CU UAGA CCGAAUUUGUuuu     a
|||||   ||| || |||| |||||||||||||      
ggugu   UGG GA AUCU GGCUUAAACagga     g
     gUU   A  G    U             auuuc 


Annotation confidence High
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Genome context
scaffold_6: 2726449-2726525 [-]

Database links

Mature dse-miR-10-5p

Accession MIMAT0008784
Description Drosophila sechellia dse-miR-10-5p mature miRNA
Sequence 9 - ACCCUGUAGAUCCGAAUUUGU - 29
Evidence not_experimental

Mature dse-miR-10-3p

Accession MIMAT0053458
Description Drosophila sechellia dse-miR-10-3p mature miRNA
Sequence 49 - CAAAUUCGGUUCUAGAGAGGUUU - 71
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218