miRBase entry: dse-mir-92a

Stem-loop dse-mir-92a

Accession

MI0009347

Description

Drosophila sechellia dse-mir-92a precursor miRNA

Sequence

aauaugaauuucccguaggacgggaaggugucaacguuuugcauuucgaauaaaCAUUGCACUUGUCCCGGCCUAUgggcgguuuguaau
..((((((((.((((((((.((((((((((.(((.((((............)))).)))))))).))))).)))))))).))))))))..

Structure

aa        u        a     -     u   c    ugcau 
  uaugaauu cccguagg cggga aggug caa guuu     u
  |||||||| |||||||| ||||| ||||| ||| ||||      
  auguuugg gggUAUCC GCCCU UUCAC GUU Caaa     u
ua        c        G     G     -   A    uaagc

Annotation confidence Not enough data

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Genome context

scaffold_13: 259011-259100 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dse-mir-92a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-92a

Accession	MIMAT0008785
Description	Drosophila sechellia dse-miR-92a mature miRNA
Sequence	55 - CAUUGCACUUGUCCCGGCCUAU - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218