miRBase entry: dse-mir-277

Stem-loop dse-mir-277

Accession

MI0009356

Description

Drosophila sechellia dse-mir-277 precursor miRNA

Sequence

uugaagguuuugggcugcgugucaggagugcauuugcacugaaacuaucugaagcaugUAAAUGCACUAUCUGGUACGACAuuccagaacguacaauc
(((.(.((((((((.(((((((((((((((((((((((.((...(.....)...)))))))))))))).))))))))).)).)))))))).).)))..

Structure

--   a g        c  -         -            c  aaa u 
  uug a guuuuggg ug cgugucagg agugcauuugca ug   c a
  ||| | |||||||| || ||||||||| |||||||||||| ||   | u
  aac u caagaccu AC GCAUGGUCU UCACGUAAAUgu ac   g c
cu   a g        u  A         A            -  gaa u

Annotation confidence Not enough data

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Genome context

scaffold_0: 15987794-15987891 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from dse-mir-277

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-277

Accession	MIMAT0008794
Description	Drosophila sechellia dse-miR-277 mature miRNA
Sequence	59 - UAAAUGCACUAUCUGGUACGACA - 81
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218