Stem-loop dse-mir-284

Accession

MI0009360

Description

Drosophila sechellia dse-mir-284 precursor miRNA

Sequence

9984 reads, 3143.0 reads per million, 1 experiments

guugcaguuCCUGGAAUUAAGUUGACUGUGUAGCcugugagggcaaggcuugaauacugcuccUGAAGUCAGCAACUUGAUUCCAGCAAUUGcggccc
(((((((((.((((((((((((((.(((...(((((((....)).))))).....(((........)))))))))))))))))))).)))))))))..

Structure

--         C              A   UGUAGCcugugagggcaaggcuugaau   gcu 
  guugcaguu CUGGAAUUAAGUUG CUG                           acu   c
  ||||||||| |||||||||||||| |||                           |||    
  cggcGUUAA GACCUUAGUUCAAC GAC                           UGA   c
cc         C              -   ---------------------------   AGU 

Annotation confidence Medium

Genome context

scaffold_0: 13609242-13609339 [+]

Mature dse-miR-284-5p

• Accession: MIMAT0053464
• Description: Drosophila sechellia dse-miR-284-5p mature miRNA
• Sequence: 10 - CCUGGAAUUAAGUUGACUGUGUAGC - 34
• Evidence: not_experimental

Mature dse-miR-284-3p

• Accession: MIMAT0008798
• Description: Drosophila sechellia dse-miR-284-3p mature miRNA
• Sequence: 64 - UGAAGUCAGCAACUUGAUUCCAGCAAUUG - 92
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218