Stem-loop dse-mir-289

Accession

MI0009369

Description

Drosophila sechellia dse-mir-289 precursor miRNA

Sequence

aguuuacaguaaaaUAAAUAUUUAAGUGGAGCCUGCGACUccagucccucugacugacugggguaagucacuugagcguuuguuggcacguaaaag
..(((((.((..(((((((.(((((((((...((...(((((((((.........))))))))).))))))))))).)))))))...)))))))..

Structure

ag     a  -aa       A         AGC  GCG         ccu 
  uuuac gu   aaUAAAU UUUAAGUGG   CU   ACUccaguc   c
  ||||| ||   ||||||| |||||||||   ||   |||||||||   u
  aaaug ca   uuguuug gaguucacu   ga   uggggucag   g
ga     -  cgg       c         ---  --a         uca 

Annotation confidence Not enough data

Genome context

scaffold_0: 5775602-5775697 [+]

Mature dse-miR-289

• Accession: MIMAT0008807
• Description: Drosophila sechellia dse-miR-289 mature miRNA
• Sequence: 15 - UAAAUAUUUAAGUGGAGCCUGCGACU - 40
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218