Stem-loop dse-mir-9c

Accession

MI0009374

Description

Drosophila sechellia dse-mir-9c precursor miRNA

Sequence

auuuuugcuguuUCUUUGGUAUUCUAGCUGUAGAuuguuucacgcacauuguauaucaucuaaagcuuuuauaccaaagcuccagcuuaaau
((((..((((...(((((((((...((((.(((((.(....(((.....)))....)))))).))))...)))))))))...))))..))))

Structure

    uu    uuU         UCU    G     u uuuc   c 
auuu  gcug   CUUUGGUAU   AGCU UAGAu g    acg a
||||  ||||   |||||||||   |||| ||||| |    ||| c
uaaa  cgac   gaaaccaua   ucga aucua c    ugu a
    uu    cuc         uuu    a     - uaua   u 

Annotation confidence Not enough data

Genome context

scaffold_7: 344907-344998 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from dse-mir-9c

Mature dse-miR-9c

• Accession: MIMAT0008812
• Description: Drosophila sechellia dse-miR-9c mature miRNA
• Sequence: 13 - UCUUUGGUAUUCUAGCUGUAGA - 34
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218