Stem-loop dse-mir-1

Accession

MI0009376

Description

Drosophila sechellia dse-mir-1 precursor miRNA

Sequence

cagccuuugagaguuccaugcuuccuugcauucaauaguuauacucaagcauaUGGAAUGUAAAGAAGUAUGGAGcgaaaucuggcga
..(((.......((((((((((((.((((((((.((((((.......))).))).)))))))).)))))))))))).......)))..

Structure

ca   uuugaga            c        a   -   au 
  gcc       guuccaugcuuc uugcauuc aua guu  a
  |||       |||||||||||| |||||||| ||| |||  c
  cgg       cGAGGUAUGAAG AAUGUAAG Uau cga  u
ag   ucuaaag            A        G   a   ac 

Annotation confidence Not enough data

Genome context

scaffold_18: 365668-365755 [+]

Mature dse-miR-1

• Accession: MIMAT0008814
• Description: Drosophila sechellia dse-miR-1 mature miRNA
• Sequence: 54 - UGGAAUGUAAAGAAGUAUGGAG - 75
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218