Stem-loop dse-mir-13b-2

Accession

MI0009378

Description

Drosophila sechellia dse-mir-13b-2 precursor miRNA

Sequence

835 reads, 263.0 reads per million, 1 experiments

ucaacGCGUCAAAAUGACUGUGAGCUauguggauuugacuucaUAUCACAGCCAUUUUGACGAGUuug
..(((.((((((((((.((((((..((((.((......)).)))))))))).)))))))))).)))..

Structure

uc   G          A      GC    u  au 
  aac CGUCAAAAUG CUGUGA  Uaug gg  u
  ||| |||||||||| ||||||  |||| ||   
  uUG GCAGUUUUAC GACACU  AUac uc  u
gu   A          C      --    u  ag 

Annotation confidence High

Genome context

scaffold_34: 345620-345687 [+]

Mature dse-miR-13b-2-5p

• Accession: MIMAT0053467
• Description: Drosophila sechellia dse-miR-13b-2-5p mature miRNA
• Sequence: 6 - GCGUCAAAAUGACUGUGAGCU - 26
• Evidence: not_experimental

Mature dse-miR-13b-3p

• Accession: MIMAT0008816
• Description: Drosophila sechellia dse-miR-13b-3p mature miRNA
• Sequence: 44 - UAUCACAGCCAUUUUGACGAGU - 65
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218