miRBase entry: dse-mir-283

Stem-loop dse-mir-283

Accession

MI0009401

Description

Drosophila sechellia dse-mir-283 precursor miRNA

Sequence

acgauucucaaaggUAAAUAUCAGCUGGUAAUUCUgggagcuaagccuaaauaugaaacacucggaauuucaguugguaucgacuuuuuugaauu
..(((((..((((((..(((((((((((.(((((((((......................))))))))))))))))))))..))))))..)))))

Structure

ac     uc      AA           U         agcuaagccu 
  gauuc  aaaggU  AUAUCAGCUGG AAUUCUggg          a
  |||||  ||||||  ||||||||||| |||||||||           
  uuaag  uuuuca  uaugguugacu uuaaggcuc          a
--     uu      gc           -         acaaaguaua

Annotation confidence Not enough data

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Genome context

scaffold_73: 136420-136514 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dse-mir-283

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-283

Accession	MIMAT0008838
Description	Drosophila sechellia dse-miR-283 mature miRNA
Sequence	15 - UAAAUAUCAGCUGGUAAUUCU - 35
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218