miRBase entry: dse-mir-124

Stem-loop dse-mir-124

Accession

MI0009402

Description

Drosophila sechellia dse-mir-124 precursor miRNA

Sequence

uacguuuuucuccugguauccacuguaggccuauauguauuuccaccaUAAGGCACGCGGUGAAUGCCAAGagcgaacgca
..(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).)))))..

Structure

ua     uu   c      c      ag    a    uau 
  cguuu  cuc ugguau cacugu  gccu uaug   u
  |||||  ||| |||||| ||||||  |||| ||||   u
  gcaag  gaG ACCGUA GUGGCG  CGGA AUac   c
ac     -c   A      A      CA    -    cac

Annotation confidence Not enough data

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Genome context

scaffold_7: 1207328-1207408 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dse-mir-124

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-124

Accession	MIMAT0008839
Description	Drosophila sechellia dse-miR-124 mature miRNA
Sequence	49 - UAAGGCACGCGGUGAAUGCCAAG - 71
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218