Stem-loop dsi-mir-9a

Accession

MI0009408

Description

Drosophila simulans dsi-mir-9a precursor miRNA

Sequence

737 reads, 7538.0 reads per million, 6 experiments

gcuauguugUCUUUGGUUAUCUAGCUGUAUGAgugauaaauaacgucaUAAAGCUAGCUUACCGAAGUUAauauuagc
(((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).))))

Structure

    -     U       UAU      G     -  gau 
gcua uguug CUUUGGU   CUAGCU UAUGA gu   a
|||| ||||| |||||||   |||||| ||||| ||    
cgau auaAU GAAGCCA   GAUCGA AUacu ca   a
    u     U       UUC      A     g  aua 

Annotation confidence High

Genome context

ref|NT_479535.1|: 19107012-19107089 [+]

Mature dsi-miR-9a-5p

• Accession: MIMAT0008843
• Description: Drosophila simulans dsi-miR-9a-5p mature miRNA
• Sequence: 10 - UCUUUGGUUAUCUAGCUGUAUGA - 32
• Evidence: not_experimental

Mature dsi-miR-9a-3p

• Accession: MIMAT0053477
• Description: Drosophila simulans dsi-miR-9a-3p mature miRNA
• Sequence: 49 - UAAAGCUAGCUUACCGAAGUUA - 70
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218