miRBase entry: dsi-mir-210

Stem-loop dsi-mir-210

Accession

MI0009414

Description

Drosophila simulans dsi-mir-210 precursor miRNA

Literature search

1 open access papers mention dsi-mir-210
(41 sentences)

Sequence

234 reads, 1037.0 reads per million, 6 experiments

aaggugcuuauugcagcugcuggccacugcacaagauuagacuuaagacucUUGUGCGUGUGACAGCGGCUAuuguaagaggccau
..(((.(((((...((((((((..((((((((((((((........)).))))))))).))).))))))))...)))))..)))..

Structure

aa   -g     ugc        gc   -         -  aga 
  ggu  cuuau   agcugcug  cac ugcacaaga uu   c
  |||  |||||   ||||||||  ||| ||||||||| ||    
  ccg  gaaug   UCGGCGAC  GUG GCGUGUUcu ag   u
ua   ga     uuA        -A   U         c  aau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

ref|NC_029795.1|: 17110581-17110666 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-210

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-210-3p

Accession	MIMAT0008849
Description	Drosophila simulans dsi-miR-210-3p mature miRNA
Sequence	52 - UUGUGCGUGUGACAGCGGCUA - 72
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218