Stem-loop dsi-mir-2a-1

Accession

MI0009418

Description

Drosophila simulans dsi-mir-2a-1 precursor miRNA

Sequence

4432 reads, 34068.0 reads per million, 6 experiments

gcugggCUCUCAAAGUGGUUGUGAAAUGcauuuccgcuuugcgcggcaUAUCACAGCCAGCUUUGAUGAGCuuagc
((((((((((((((((((((((((.((((.....(((.....))))))).))))))))).)))))).)))))))))

Structure

         -      -         A    auuuc   u 
gcugggCUC UCAAAG UGGUUGUGA AUGc     cgc u
||||||||| |||||| ||||||||| ||||     ||| u
cgauuCGAG AGUUUC ACCGACACU Uacg     gcg g
         U      G         A    -----   c 

Annotation confidence Not enough data

Genome context

ref|NT_479533.1|: 19065585-19065660 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dsi-mir-2a-1

Mature dsi-miR-2a-1-5p

• Accession: MIMAT0053486
• Description: Drosophila simulans dsi-miR-2a-1-5p mature miRNA
• Sequence: 7 - CUCUCAAAGUGGUUGUGAAAUG - 28
• Evidence: not_experimental

Mature dsi-miR-2a-3p

• Accession: MIMAT0008853
• Description: Drosophila simulans dsi-miR-2a-3p mature miRNA
• Sequence: 49 - UAUCACAGCCAGCUUUGAUGAGC - 71
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218